Brian
Brian is a free, open source simulator for spiking neural networks. It is written in the Python programming language and is available on almost all platforms. Brian is designed to be easy to learn and use, highly flexible and easily extensible.
Cite this software
Description
Brian2
A clock-driven simulator for spiking neural networks
Brian is a free, open source simulator for spiking neural networks. It is written in the Python programming language and is available on almost all platforms. We believe that a simulator should not only save the time of processors, but also the time of scientists. Brian is therefore designed to be easy to learn and use, highly flexible and easily extensible.
Please report issues at the GitHub issue tracker (https://github.com/brian-team/brian2/issues) or in the Brian forum (https://brian.discourse.group).
Documentation for Brian 2 can be found at http://brian2.readthedocs.org
Brian 2 is released under the terms of the CeCILL 2.1 license.
If you use Brian for your published research, we kindly ask you to cite our article:
Stimberg, M, Brette, R, Goodman, DFM. “Brian 2, an Intuitive and Efficient Neural Simulator.” eLife 8 (2019): e47314. doi: 10.7554/eLife.47314.
Quickstart
Try out Brian on the mybinder service:
Dependencies
The following packages need to be installed to use Brian 2 (cf. pyproject.toml):
- Python >= 3.12
- NumPy >= 2.0
- SymPy >= 1.2
- Cython >= 0.29.21
- PyParsing >= 3
- Jinja2 >= 2.7
- setuptools >= 61
- py-cpuinfo (only required on Windows)
- packaging
For full functionality, you might also want to install:
- GSL >=1.16
- SciPy >=0.13.3
- Matplotlib >= 2.0
To build the documentation:
- Sphinx >=7,<9
- ipython >=5
- sphinx-tabs
To run the test suite:
- pytest >= 8
- pytest-xdist (optional)
Testing status for master branch
Reference papers
- 1.Author(s): Denis Alevi, Marcel Stimberg, Henning Sprekeler, Klaus Obermayer, Moritz AugustinPublished in Frontiers in Neuroinformatics by Frontiers Media SA in 202210.3389/fninf.2022.883700
- 2.Author(s): Marcel Stimberg, Dan F. M. Goodman, Thomas NowotnyPublished in Scientific Reports by Springer Science and Business Media LLC in 202010.1038/s41598-019-54957-7
- 3.Author(s): Marcel Stimberg, Romain Brette, Dan FM GoodmanPublished in eLife by eLife Sciences Publications, Ltd in 201910.7554/elife.47314
- 4.Author(s): Marcel Stimberg, Dan F. M. Goodman, Victor Benichoux, Romain BrettePublished in Frontiers in Neuroinformatics by Frontiers Media SA in 201410.3389/fninf.2014.00006
- 5.Author(s): Dan Goodman, Romain BrettePublished in Scholarpedia by Scholarpedia in 2013, page: 1088310.4249/scholarpedia.10883
- 6.Author(s): Romain BrettePublished in Network: Computation in Neural Systems by Informa UK Limited in 2012, page: 150-15610.3109/0954898x.2012.716902
- 7.Author(s): Bertrand Fontaine, Dan F. M. Goodman, Victor Benichoux, Romain BrettePublished in Frontiers in Neuroinformatics by Frontiers Media SA in 201110.3389/fninf.2011.00009
- 8.Author(s): Romain Brette, Dan F. M. GoodmanPublished in Neural Computation by MIT Press - Journals in 2011, page: 1503-153510.1162/neco_a_00123
- 9.Author(s): Cyrille RossantPublished in Frontiers in Neuroinformatics by Frontiers Media SA in 201010.3389/neuro.11.002.2010
- 10.Author(s): Dan F. M. GoodmanPublished in Neuroinformatics by Springer Science and Business Media LLC in 2010, page: 183-19610.1007/s12021-010-9082-x
- 11.Author(s): Dan F M. GoodmanPublished in Frontiers in Neuroscience by Frontiers Media SA in 2009, page: 192-19710.3389/neuro.01.026.2009
- 12.Author(s): Dan GoodmanPublished in Frontiers in Neuroinformatics by Frontiers Media SA in 200810.3389/neuro.11.005.2008
Mentions
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